Cybertaxonomist

Entomology Department, Natural History Museum, Cromwell Road, London, SW7 5BD, U.K.

E-mail: vince@vsmith.info (preferred) or v.smith@nhm.ac.uk (official), iChat Video Conferencing: vsmithuk@mac.com (by invitation) Tel: +44 (0) 207 942 5127, Fax: +44 (0) 207 942 5661, Skype: vsmithuk


I am a research scientist at the Natural History Museum, London. My official title is 'cybertaxonomist,' which means I apply computer technology and the web to the study of biodiversity. When I am not doing this, I work on the evolution of parasitic lice (Insecta: Phthiraptera). You can track my research interests and activities through my blog, publications, presentations, reading list, calendar, and my twitter feed.

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Scratchpad update, May 2009

Scratchpad Update

The Scratchpad project has seen a number of developments recently. Here is a quick update on the key topics.

Fourth International Congress on Phthiraptera (ICP4)

ICP4 Logo

The Fourth International Congress on Phthiraptera (ICP4) that will be held in the conference facilities of the Mustafa Hotel, Urgup, Cappadocia, Turkey, between June 13-18, 2010. Further details can be found on the conference website

Scratchpad Training Courses 2009

ScratchpadTrainingMini.jpg

We will be running a series of Scratchpad training courses, tacked on to various meeting during 2009. The first will be run at end of the e-Biosphere meeting this June, and at the time of writing we still have a few places left (four to be exact). This course will be on Thursday June 4th at the Natural History Museum. An outline of this free 1-day event can be found at http://scratchpads.eu/training. If you or your colleagues are interested in attending, please use this web form to sign up.

Sustainability matters in informatics

Parts of the taxonomic community just don't get sustainability. I have always known this was a problem, but two events this week demonstrate just how much work there is to do in explaining why sustainability matters. Early this week I received a series of e-mails on the TDWG mailing list that said the websites for the two LSID projects on SourceForge are broken (see here and here). For the uninitiated, LSID stands for 'Life Science Identifier'. These are supposed to be the Globally Unique IDentifier (GUID) of choice for the taxonomic community. In essence this is the system of numbering (a barcode if you like) that we give biodiversity data, such that we can electronically find it again. In theory, LSID's were our community’s way of guaranteeing the sustainability (i.e. citability) of biodiversity data, and it is thus deeply ironic that the LSID project has itself proven unsustainable.

The 'post-taxonomist' era

Sarah Kemmitt and colleagues at the British Library have just released a podcast of Rod Page's recent talk ‘What’s in a name? – Taxonomy in crisis’. This is part of the libraries excellent TalkScience series. The podcast is limited to Rod's initial presentation, but most of the action took place in the discussion that followed, and in the pub afterwards. I was a little disappointed that the taxonomic luminaries in the audience couldn't muster a stronger defense of taxonomy. A recurring theme of the discussion was the 'post-taxonomist' era, and how we approach the challenges of taxonomy and systematics in a period when there are no more professionals.

"Going Digital" Summary

With apologies to Rod Page, here is my summary of his recent talk "Going Digital" at the Natural History Museum, London on March 17, 2009. Errors and omissions are mine, with the exception of Rod's closing remark which I have quoted verbatim, rather than attempt to paraphrase. For those with the time (and the technology), I would very strongly recomend watching the video of Rod's talk, and viewing his slides. To make things easier, I have put together a page pulling together the various electronic strands of Rods talk in various formats. However, here is my executive summary of his presentation:

"Going Digital" Resources

Rod Page, professor of taxonomy at the University of Glasgow gave two fascinating and complementary talks on the future of taxonomy in London on March 17th. I have pulled together the various stands of Rod’s talk at the Natural History Museum, which are given below. If you do nothing else (and have a spare hour!), watch the video of Rod’s talk.

Rod Page Talks Taxonomy

Rod Page, Professor of Taxonomy at Glasgow University will be giving two talks in London about taxonomy on March 17th:

"Going digital: what's in it for taxonomy and taxonomists?" Flett Theatre, NHM 11-12.30, refreshments from 10.30.

"What's in a name: Taxonomy in Crisis" British Library, 18-20.30.

Roberts, D.*, Harman, K., Rycroft, S.D. & Smith, V.S (2008)

Scratchpads in the Biodiversity Informatics Landscape.

Invited. Stockholm Biodiversity Informatics Symposium 2008, Swedish Museum of Natural History, Stockholm, Sweden  1-4 December 2008. Dave Roberts was the presenting author. Download the fileView this presentation on Slideshare

Roberts, D.*, Harman, K., Rycroft, S.D. & Smith, V.S (2009)

Scratchpads: Building web communities supporting biodiversity science.

Invited. Information Technology in Biodiversity Conservation and in Agriculture organized by the Club of Rome and the EU ICT-ENSURE project, at UNESCO, Paris. January 15th, 2009. Dave Roberts was the presenting author. Download the fileView this presentation on Slideshare


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